Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme180141g00001 ATGGGCGCTTCACCTGATGCGGGTCAGCTGATGGCGTTGCTCTTGAAACTTCTAAATGCAAAGAAGACAATCGAAGTAGGAGTTTTCACTGGATACTCTCTTCTCCTCACTGCACTTAACATTCCTCATGATGGAAAG 138 0.4565 MGASPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALNIPHDGK 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme180141g00001 46 Gene3D Vaccinia Virus protein VP39 1 46 IPR029063 -
Trme180141g00001 46 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 45 IPR029063 -
Trme180141g00001 46 Pfam O-methyltransferase 1 46 IPR002935 GO:0008171
Trme180141g00001 46 PANTHER O-METHYLTRANSFERASE-RELATED 1 46 - -
Trme180141g00001 46 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 46 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme180141g00001 Trme-Chr180141 30 167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme180141g00001 1 46 Monolignol Biosynthesis Gene Families AT4G26220 76.087 1.50e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme180141g00001 K00588 - gmx:100795229 72.0182