Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17999g00001 CAATTCGCACGACTCGTGAAACTCTTGGATGAGGATAAGGCATCTGACAAAATTGTTTTAGGAGGTCAGAGGGATGAAAAGAAATTAAAGATTGCTCCAACTATCTTATTGGATGTTCCAGAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTGCCAATTATCACTGTTGACAACATAGAAGATAGCTATGGTATAATAAAATCAAGGCCAAAACCTCTCGCTGCATATCTCTTCACAAACAATGAGCAACTGAAGAAGGATTATGTGGATAAGATATCTTCTGGAGGGATGCTCATCAACGACGCTGTCGTGCATGTTGCAACTCGTGGTTTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTGTTACCACGGAAAGTTCTCTTTTGATAGTTTCAGCCATAAGAAGGCAGTTTTGTATAAAGGTTTTGATTCAGATCCAGACATAAGGCATGTTTACATGTATTTGTCCTGTTCCTGCATTTGTTTTGGTAAGGTGGAGGGCCAGAAGCCCCTGTAA 534 0.4082 QFARLVKLLDEDKASDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVDNIEDSYGIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVATRGLPFGGVEESGMGCYHGKFSFDSFSHKKAVLYKGFDSDPDIRHVYMYLSCSCICFGKVEGQKPL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17999g00001 177 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 124 141 IPR016162 GO:0016491
Trme17999g00001 177 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 123 IPR016163 GO:0016620
Trme17999g00001 177 Pfam Aldehyde dehydrogenase family 1 143 IPR015590 GO:0016491
Trme17999g00001 177 PANTHER ALDEHYDE DEHYDROGENASE 1 153 IPR012394 GO:0006081
Trme17999g00001 177 SUPERFAMILY ALDH-like 1 152 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17999g00001 Trme-Chr17999 76 1415 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17999g00001 1 156 Aldehyde Dehydrogenase Gene Family AT1G44170 61.538 1.67e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17999g00001 K00128 - gmx:100800699 283.878