Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme179756g00001 ATGTCGAATCACCCTTCCGATACTCCCGCCGACGATTTCCTCGAACAAATTCTCGGCCTCCCGAATTTTACCTCCGCCGACGGTACTGACACTTCTTCCTTAGCTGCTCCGATGATGCTGCAGCTCAACTCCGGCGACGCAGCCACTCACCTTGGAGCCGGAGGTGGATTTCATGCACCGGTTTACCATTTGGGCCTGAGCTTGGACCAAGGCAAAGGAGGAGGGTTCTTGAAGCCCGATGATGCTTCCGGGAGTGGGAAGCGTTT 266 0.5602 MSNHPSDTPADDFLEQILGLPNFTSADGTDTSSLAAPMMLQLNSGDAATHLGAGGGFHAPVYHLGLSLDQGKGGGFLKPDDASGSGKR 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme179756g00001 88 MobiDBLite consensus disorder prediction 69 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme179756g00001 Trme-Chr179756 213 478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme179756g00001 8 88 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G03040 50.000 1.06e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme179756g00001 - - tpra:123902976 180.259