Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17961g00001 GCTGTTCTAGAGACTGTGGCCAGAGTCACGCCGAACAAGAATGACACTAAAGATGAAAAGTCATTTCAGCTCCATCGTGTATTCAATAGAGGCGAAGACACCCCAATGTTAATAGATCGAAAGGACAATGTATTTATCATTTCTAACTTTAAATCCAAGTATCCAGTGCTGCAGCTAGATTTACGATTGATTTCAGACTTGGTCATTGCTATTGTTTCGGCAACTTGTGGTGGTGTTGCATTTGCTTTTGCTGGACAACCGGTCATTACTGGATATCTTCTAGCTGGCTCCATTGTTGGACCTGGAGGCTTTAACTTCATCAATGAAATGGTGCAG 336 0.4196 AVLETVARVTPNKNDTKDEKSFQLHRVFNRGEDTPMLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIAIVSATCGGVAFAFAGQPVITGYLLAGSIVGPGGFNFINEMVQ 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17961g00001 112 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 2 112 IPR045158 GO:0015386|GO:0071805|GO:1902600
Trme17961g00001 112 Gene3D - 61 112 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17961g00001 Trme-Chr17961 209 923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17961g00001 1 112 Antiporters AT5G11800 80.508 3.11e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17961g00001 K26735 - gmx:100811030 214.927