Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1794g00001 ATGGATGAATTGGGAAATAGTAGCTGTTATTGGAGTAGAGAGCAAGATATAGCTTTTGAAAATGCGTTGGCAAATCATCCCGAAGAATGGGAGCAATTTGCAGCCTATGTAACTGGGAAAAGTTTGGAAGAGATTAAGCGTCATTATGTGGATTTGATTGATGATGTCAACCACATTGAATCTGGCTATGTGCCTCTGCCAGATTATAATGAAATAAGAGCTGTCAAAAAGGGAACTGAGACTTCAAGAACTGTTCAAGAACGGCGAAAGGGTATTCCTTGGACAGAAGCTGAACATAGGTTNGTTAGTTTATCTTTGCTTTGGTATTAA 330 0.3879 MDELGNSSCYWSREQDIAFENALANHPEEWEQFAAYVTGKSLEEIKRHYVDLIDDVNHIESGYVPLPDYNEIRAVKKGTETSRTVQERRKGIPWTEAEHRXVSLSLLWY 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1794g00001 109 SUPERFAMILY Homeodomain-like 10 59 IPR009057 -
Trme1794g00001 109 CDD SANT 11 49 IPR001005 -
Trme1794g00001 109 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 8 109 IPR043363 -
Trme1794g00001 109 FunFam Transcription factor SRM1 4 66 - -
Trme1794g00001 109 Gene3D - 5 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1794g00001 Trme-Chr1794 643 972 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme1794g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1794g00001 - - tpra:123890573 203.756