Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme179408g00001 ATGGATACTTCCTCTCATCAAGGTGAACGCGAATTTCACAACGAACTCTTCTTCGCTTCAAAGCTTCGTTCTCTCTATATAATTCCTCCGTTAGGGTTTTCGTCTGATCCAAAACGACGTCGTTTTCTACTTGTTTACCCTTTAATGCAAAACGGTAATCTTCAAGATGCACTTTTGAAGCGTAAGTGTTCTGAACTTTTTAATTGGGAAAAAAGATTTGAAATTGTGTTGGATATTGCTAAAGGACTTTGTTATCTTCACTCTTTTGATCCTCCTGTTATACATGGTGATATAAAACCTAGTAATATTCTTTTAGATTGTGATTTTAATGCTAAAATCGGTGATTTTGGACTTGCTCGGTTGAAATCGGAGCCGGTTAGGGTTGATGTTGAGCTTTTGG 400 0.37 MDTSSHQGEREFHNELFFASKLRSLYIIPPLGFSSDPKRRRFLLVYPLMQNGNLQDALLKRKCSELFNWEKRFEIVLDIAKGLCYLHSFDPPVIHGDIKPSNILLDCDFNAKIGDFGLARLKSEPVRVDVELL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme179408g00001 133 Pfam Protein tyrosine and serine/threonine kinase 4 122 IPR001245 GO:0004672|GO:0006468
Trme179408g00001 133 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Trme179408g00001 133 ProSiteProfiles Protein kinase domain profile. 1 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme179408g00001 133 FunFam Os07g0541700 protein 49 130 - -
Trme179408g00001 133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Trme179408g00001 133 SUPERFAMILY Protein kinase-like (PK-like) 6 125 IPR011009 -
Trme179408g00001 133 PANTHER OS07G0586332 PROTEIN 1 125 IPR044576 -
Trme179408g00001 133 SMART tyrkin_6 1 133 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme179408g00001 Trme-Chr179408 14 413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme179408g00001 1 124 Receptor kinase-like Gene Family AT3G58690 48.062 1.12e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Trme179408g00001 PK_Tyr_Ser-Thr 1.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme179408g00001 - - qsa:O6P43_008299 199.519