Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme179073g00001 ATGAAAAAAAGTTTGCGCTCTGGTTTAAGCAGCCTTCCACAGCCCAAAAATGAGTACCAGATAGTGATGCAACCAGTTCAAGAAGATGCTGAAGAGCCTGAGGAGAAGATTGAGGAGGATATGTCTGATAGAATGGCTAGAGAAAAGGCTGAAGAAGAGGCAAGGCAGCAGGCATTACTTAGAAAACGATCAAAAGTCCTTCAAAGGGAACTTCCTAGGCCTCCTCCAGCATCTATCGAGCTTATTAGGAACTCGTTGATAAGAGCTGACGGGGACAAGAGTTCATTTGTTCCACCAACCAATATTGAGCAAGCCGATGAGATGATAAGAAGGGAGCTTCTAACCTTACTGGAGCATGACAATGCCAAATATCCACTTGAGGAGATAGCAAATAAGGAGAGAAAGAAAGGATCCAAACGAGCAGCAAATGGGCCTGCTGTCCCTGTCATAGAAGATTTTCAGGAGGA 467 0.4454 MKKSLRSGLSSLPQPKNEYQIVMQPVQEDAEEPEEKIEEDMSDRMAREKAEEEARQQALLRKRSKVLQRELPRPPPASIELIRNSLIRADGDKSSFVPPTNIEQADEMIRRELLTLLEHDNAKYPLEEIANKERKKGSKRAANGPAVPVIEDFQE 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme179073g00001 155 MobiDBLite consensus disorder prediction 39 57 - -
Trme179073g00001 155 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 154 IPR047242 GO:0000398|GO:0000974
Trme179073g00001 155 MobiDBLite consensus disorder prediction 129 155 - -
Trme179073g00001 155 MobiDBLite consensus disorder prediction 24 57 - -
Trme179073g00001 155 Pfam pre-mRNA splicing factor component 1 138 IPR021786 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme179073g00001 4 155 MYB-Related Transcription Factor Family AT1G09770 73.377 2.83e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme179073g00001 K12860 - gmx:100790369 241.506