Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme178664g00001 TTGGAAGGGGATGCATCTGATAAGATATTGCAAGCGGTAAGGGATTTGCTTAAGAATAGAAGCCCATTGAAATCTGATGCTGATGCGGTTACAGTGCTGGATGGAACACAAGAAGGGGCTTATCAATGGCTTGAAGCTGCATTTATTATGAATGCATCCCGAGACTAG 168 0.4345 MEGDASDKILQAVRDLLKNRSPLKSDADAVTVLDGTQEGAYQWLEAAFIMNASRD 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme178664g00001 55 Gene3D Exopolyphosphatase. Domain 2 34 51 - -
Trme178664g00001 55 Pfam GDA1/CD39 (nucleoside phosphatase) family 2 49 IPR000407 GO:0016787
Trme178664g00001 55 Gene3D - 4 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme178664g00001 Trme-Chr178664 1 347 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme178664g00001 5 50 Calmodulin-binding Proteins AT3G04080 65.217 1.52e-15 66.2