Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme178436g00001 GGTTCTGGGTCTAGTCCGTTTGCTCGACCGGAGTTGAGGAATGTCGTGCCTCCTCGGACTTACTATGAGTCGCCGCAGACTATAATGGAGCTTAGAGCAATTGCTTGTGTGGAGGCACAGTTAGGAGAGCCTTTAAGGGAAGATGGACCTATTTTAGGAATTGAGTTTGATCCATTGCCACCTGATGCATTTGGGGCACCATTAG 205 0.4927 GSGSSPFARPELRNVVPPRTYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPL 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme178436g00001 68 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 16 68 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme178436g00001 Trme-Chr178436 277 481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme178436g00001 1 68 Homeobox Transcription Factor Family AT1G28420 58.824 6.34e-19 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme178436g00001 - - gmx:100777465 129.413