Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17839g00001 CAAACTGTGGAGAAACAAGCCGAGAACCTGAGGAGTATTTCTAAYARGTACGAACTTGATAAGAAGAAATGGGCAGAAGCAATTACTAGTTTACAGGAACAAGTAAAGGTGATGAAGAGTGAACAATCTCGGCTTTCCCTTGAAGCACATGAGTGTGTTGATTCAATCCCTGAATTAAATGAGATGGTTTTTGCAGTTCAGGAATTGGTTAAGCAGTGTGAAGATCTCAAAGTGAAATACTATGAAGAGATGACACAGAGAAAGAARCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGTTGTCGACCATTGAATAAGGGTGAAATGTCAGCTGGGTGTACAACAGTAGTGGATTTTGATGCATCAAAGGATGGATGCCTTGGAATTTTGACAACTGGCTCCACAAAAAAATTCAGATTTGACAGGGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCACCGATGGTAATCTCTGTGTTGGATGGCTACAACGTTTGCATCTTTGCTTACGGACAAACAGGAACAGGAAAAACATTTACCATGGAAGGAACCGAACAGAATAGAGGAGTCAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACATTTTCATACGACATATCTGTTAGCGTGCTTGAGGTTTA 695 0.3957 QTVEKQAENLRSISNXYELDKKKWAEAITSLQEQVKVMKSEQSRLSLEAHECVDSIPELNEMVFAVQELVKQCEDLKVKYYEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKGEMSAGCTTVVDFDASKDGCLGILTTGSTKKFRFDRVYTPKDDQVDVFADASPMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKVSKERSETFSYDISVSVLEV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17839g00001 231 ProSiteProfiles Kinesin motor domain profile. 100 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme17839g00001 231 Coils Coil 21 41 - -
Trme17839g00001 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 231 IPR027417 -
Trme17839g00001 231 Gene3D Kinesin motor domain 46 231 IPR036961 -
Trme17839g00001 231 Pfam Microtubule binding 81 231 IPR031852 GO:0008017
Trme17839g00001 231 PANTHER KINESIN-LIKE PROTEIN KLP-3 8 231 IPR027640 GO:0003777|GO:0007018
Trme17839g00001 231 SMART kinesin_4 98 231 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17839g00001 Trme-Chr17839 251 1419 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17839g00001 48 231 Calmodulin-binding Proteins AT5G65930 38.095 6.40e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17839g00001 K10406 - gmx:100800016 414.846