Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17832g00001 ATGCGCAAACTCCATTCATTCTCTCCCAGCAATGACACGTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAGCGAGCTAAAAGAACTGGTTCTGACGGTCTTCGTTTAAAAGAAGGTATACACATCAATAGAGGTCTTCTTGCACTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAACGAAAGGAGGGTGTACATGTCCCTTATCGGGATAGCAAACTCACTCGACTGTTACAGGATTCACTTGGTGGAAACAGCAGAACTGTCATGATAGGTAACTACTACTACTGA 330 0.4364 MRKLHSFSPSNDTSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIGNYYY 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17832g00001 109 Pfam Kinesin motor domain 17 105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme17832g00001 109 PRINTS Kinesin heavy chain signature 80 101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme17832g00001 109 PRINTS Kinesin heavy chain signature 26 44 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme17832g00001 109 ProSitePatterns Kinesin motor domain signature. 25 36 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trme17832g00001 109 SMART kinesin_4 1 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme17832g00001 109 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 14 105 IPR027640 GO:0003777|GO:0007018
Trme17832g00001 109 ProSiteProfiles Kinesin motor domain profile. 1 109 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme17832g00001 109 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 106 IPR027417 -
Trme17832g00001 109 Gene3D Kinesin motor domain 4 107 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17832g00001 Trme-Chr17832 319 1091 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17832g00001 26 106 Calmodulin-binding Proteins AT5G65930 54.321 3.88e-21 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17832g00001 - - gmx:100787957 195.667