Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme178088g00001 AACTTCAGTTGCAACAAGAAGATAATCGGAGCACGATTCTACGCTCGTGGAGACGATAGTGCAAGAGACATTACTGGTCATGGAACTCACACATCATCAATAGTAGGTGGAAGAGAGGTGAAAGGTGTAAGTTTTGATGGTCTTGCAAAAGGCACTGCTAGAGGTGGAGTCCCATTGTCAAGGATTGCTGCATACAAAATTTGTAACATACGTGATGTTTTGACATGCACTAGTGATGCTATGTTAGCTGCATTTGATGATGCCATTGCTGATGGAGTTGACGTCATCACTATCTCTATGGGTTCACTAATAGGCGATATTGAATTTGTGAATGATCCAATTGCCATTGGTTCTTTTCATGCCATGGAGAAGGGAATACTCACAACGCAAGCGGGAGGAAACACTGGTCCTAAACCTAGTAGTATTACAAGTGTAGCACCTTGGTTATTTAGTGTTGCTGCAACGACCATCGATCGTCAA 480 0.4271 NFSCNKKIIGARFYARGDDSARDITGHGTHTSSIVGGREVKGVSFDGLAKGTARGGVPLSRIAAYKICNIRDVLTCTSDAMLAAFDDAIADGVDVITISMGSLIGDIEFVNDPIAIGSFHAMEKGILTTQAGGNTGPKPSSITSVAPWLFSVAATTIDRQ 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme178088g00001 160 Gene3D Peptidase S8/S53 domain 1 157 IPR036852 GO:0004252|GO:0006508
Trme178088g00001 160 SUPERFAMILY Subtilisin-like 1 158 IPR036852 GO:0004252|GO:0006508
Trme178088g00001 160 ProSiteProfiles Serine proteases, subtilase domain profile. 1 160 - -
Trme178088g00001 160 Pfam Subtilase family 18 149 IPR000209 GO:0006508|GO:0008236
Trme178088g00001 160 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 160 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme178088g00001 Trme-Chr178088 2 481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme178088g00001 1 160 Subtilisin-like Serine Gene Family AT5G59130 60.000 1.78e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme178088g00001 - - mtr:11442885 220.705