Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme178069g00001 ATGTTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGGTTCCAGGGGTTATGATAATACGTATGAAATCTGCATTACTTTGCTTTGCAAATGCCAATTTCGTTAAAGAAAGGATCATCAAATGGGTGACTCAGGAAGAATCAGAAGATGACAAGGGAAATTCAAAAAGCTCCATTCAACTTGTTATTCTTGACACCTCAA 202 0.3713 MFCDVDQYPMAIQVPGVMIIRMKSALLCFANANFVKERIIKWVTQEESEDDKGNSKSSIQLVILDTS 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme178069g00001 67 Gene3D STAS domain 3 67 IPR036513 -
Trme178069g00001 67 Pfam STAS domain 8 67 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme178069g00001 Trme-Chr178069 74 385 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme178069g00001 2 67 Inorganic Solute Cotransporters AT5G10180 55.224 6.72e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme178069g00001 K17469 - gmx:100781327 122.864