Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme177600g00001 ATGTCAGAGCTAATGAAAAAGCCAGAGATATTCAAGAGAGCAACAGATGAACTAGACAGAGTAATAGGAAAAGATAGATGGGTTGAAGAGGAAGACATTGTGAATTTACCTTATGTGTATGCAATTGCTAAAGAAACAATGAGGCTACATCCAGTGGCACCATTGTTAGTGCCAAGAGAAGTTAGAGAAGATTGCAATGTTGATGGTTATGATATCCCAAAAGGGACTTTAATTTTTGTCAATAGTTGGGCAATTGGAAGAGATTCTAATAGTTGGGATAATCCATATGAGTTTA 295 0.3627 MSELMKKPEIFKRATDELDRVIGKDRWVEEEDIVNLPYVYAIAKETMRLHPVAPLLVPREVREDCNVDGYDIPKGTLIFVNSWAIGRDSNSWDNPYEF 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme177600g00001 98 Gene3D Cytochrome P450 1 98 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme177600g00001 98 PRINTS E-class P450 group I signature 81 98 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme177600g00001 98 PRINTS E-class P450 group I signature 40 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme177600g00001 98 PANTHER CYTOCHROME P450 98A9 1 98 - -
Trme177600g00001 98 Pfam Cytochrome P450 3 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme177600g00001 98 SUPERFAMILY Cytochrome P450 1 98 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme177600g00001 Trme-Chr177600 1 295 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme177600g00001 1 98 Cytochrome P450 AT4G12300 60.204 6.49e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme177600g00001 K20623 - ag:AAG44132 175.252