Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme177529g00001 ATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCAGCTGTTATATTGGTGATCATTGTAAAAACAATTGTAGCTGCAGCTGTTGTCAAGGGCTTTGGATACAACAACAAGACTTCCATTCTTGTTGGGATGTCCTTGGCACAAATTGGGGAATTTGCCTTTGTTCTTCTCAGTCGTGCTTCGAATGTTCATTTAGTTGAG 216 0.3935 MLIHVHFLWNHVDILLAAVILVIIVKTIVAAAVVKGFGYNNKTSILVGMSLAQIGEFAFVLLSRASNVHLVE 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme177529g00001 72 Pfam Sodium/hydrogen exchanger family 2 67 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme177529g00001 72 Gene3D - 1 72 IPR038770 -
Trme177529g00001 72 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 72 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme177529g00001 Trme-Chr177529 34 344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme177529g00001 1 72 Antiporters AT2G19600 83.333 1.43e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme177529g00001 K26735 - gmx:100800102 113.235