Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme177280g00001 CTCGGCGGTGGATCTGCTCCGTATTTTCACGACACAATCGCGATCGGAGCTTTTGCCGCGGTTGAGCGTGGGATCTTCGTTTCATGCTCCGCTGGAAACAGCGGACCGACTAAAGCTTCACTCGCTAACGTCGCGCCGTGGATTATGACGGTTGGAGCCGGAACTCTCGACCGAGATTTTCCGGCTTACGCAACGTTAGGTAATAAAAAACGGTTTTCGGGAGTTTCACTTTACAGTGGAAAAGGAATGGGAAATAAACCGGTTAGTTTGGTTTATTTCAAAGGTTCAAATTCAAACCAATCCGCGAGTATTTGTTTAGCCGGTTCACTTAACCCGGATTTAGTTCGTGGAAAAGTAGTTATATGCGATAGAGGAATCAACGCGCGTGTTGAGAAAGGTAAAGTTGTAAAAGAAGCCGGTGGAATTGGAATGATACTCGCGAACACCGTCGCGAGTGGGGAAGAGTTAGTGGCGGATAGTCAC 483 0.4803 LGGGSAPYFHDTIAIGAFAAVERGIFVSCSAGNSGPTKASLANVAPWIMTVGAGTLDRDFPAYATLGNKKRFSGVSLYSGKGMGNKPVSLVYFKGSNSNQSASICLAGSLNPDLVRGKVVICDRGINARVEKGKVVKEAGGIGMILANTVASGEELVADSH 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme177280g00001 161 Gene3D - 57 152 - -
Trme177280g00001 161 Pfam PA domain 102 151 IPR003137 -
Trme177280g00001 161 ProSiteProfiles Serine proteases, subtilase domain profile. 1 161 - -
Trme177280g00001 161 SUPERFAMILY Subtilisin-like 4 93 IPR036852 GO:0004252|GO:0006508
Trme177280g00001 161 FunFam subtilisin-like protease SBT1.5 57 161 - -
Trme177280g00001 161 Gene3D Peptidase S8/S53 domain 2 56 IPR036852 GO:0004252|GO:0006508
Trme177280g00001 161 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 152 IPR045051 -
Trme177280g00001 161 CDD PA_subtilisin_like 63 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme177280g00001 Trme-Chr177280 1 483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme177280g00001 1 161 Subtilisin-like Serine Gene Family AT2G05920 75.776 9.99e-83 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme177280g00001 - - gmx:100797543 278.1