Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme177252g00001 ATGCTAACATTGATGACAGGGAGAAAGATGGTAACTGGAAGTAATATTGGAGGAATGAAAGAGACTCAAGAGATGATTGATTTTGCTGCTAAACACGATGTAAAACCTACCATTGAAGTCATTCCTATGGATTATGTTAACATTGCAATGGAGCGACTCCTCAAAGCAGATGTCAAATATCGATTTGTGATTGACATTGGAAACACTCTCAAACCAAGCTCTCAACTCTAG 231 0.381 MLTLMTGRKMVTGSNIGGMKETQEMIDFAAKHDVKPTIEVIPMDYVNIAMERLLKADVKYRFVIDIGNTLKPSSQL 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme177252g00001 76 FunFam Putative cinnamyl alcohol dehydrogenase 6 37 66 - -
Trme177252g00001 76 Gene3D - 5 70 - -
Trme177252g00001 76 PANTHER ALDEHYDE REDUCTASE 3 69 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme177252g00001 Trme-Chr177252 184 414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme177252g00001 1 76 Monolignol Biosynthesis Gene Families AT4G37990 64.474 7.28e-28 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme177252g00001 K23232 - gmx:100809071 123.635