Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17705g00001 ATGGCGCCAACCAAGGAAGAAGAGCGTAAATTGAAGGAACATAAAGATGACTCTCCAAACAAACTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTTCTCGATGTACCTTTCGCATTTAAAAGGGTGGAAGCTATGCTTTACATAGCAAATTTTGAGTCTGAAGTGGAGTATCTTCGGAAATCCTTTCAAACTCTAGAGGTTGCATGTGAAGAGCTACGAAACAGTAGAATGTTCTTGAAGCTTCTAGAAGCTGTGCTCAAAACTGGAAACCGCATGAACGTTGGAACAAACCGAGGTGATGCACATGCATTCAAGCTCGATACACTTCTCAAGCTGGTTGATGTCAAAGGCGCAGATGGAAAAACAACTCTTCTACACTTTGTTGTACAAGAAATCATTAGAACCGAAGGAGCTCGTCATTCGGATACTACTACTAATCAAACACCGGCCACAATATTGAGCGACGACGCCAAGTGTAGAAGACTCGGCCTTCAAGTAGTATCTAGTCTAAGTTCCGATCTAGCCAACGTGAAGAAAGCCGCAGCGATGGACTCCGAAGTTCTCACAAGCGAAGTCTCTAAACTTTCAAAAGGAATCACACACATTGCCGAGATYGTGAAAYTGAATCAAACRGCAGGATCRGACGAAACCGTTAAAAAATTCACAGAATCAATGAACAAGTTYATGAGAATGGCTGARGAGGAGATTGTTAGAATTCAAGCACAAGAAAGTGTTGCTTTATCACTTGTGAAGGAGATCACAGAGTATTTTCATGGAAACTTGTCTAAAGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTTTTAACAGTTCTTGATAGGGTATGCAGAGAAGTTGGTAATATAAATGAAAAGACCATGATTAGTTCAGCTCATAGATTTCCGGTTCCGGTNAACCCTATGCTTCCACAACCACTTCCTGGATTACATGGAAGGAGAAATTACAGCTCCTCAGACGACGATAGTTCGTCTCCTTAG 1008 0.4117 MAPTKEEERKLKEHKDDSPNKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARHSDTTTNQTPATILSDDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLTSEVSKLSKGITHIAEIVKLNQTAGSDETVKKFTESMNKFMRMAEEEIVRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCREVGNINEKTMISSAHRFPVPVNPMLPQPLPGLHGRRNYSSSDDDSSSP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17705g00001 335 SMART it6_source 1 297 IPR015425 -
Trme17705g00001 335 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 308 IPR015425 -
Trme17705g00001 335 MobiDBLite consensus disorder prediction 312 335 - -
Trme17705g00001 335 PANTHER FORMIN-RELATED 1 329 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Trme17705g00001 335 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 296 - -
Trme17705g00001 335 Gene3D Formin, FH2 domain 1 303 IPR042201 -
Trme17705g00001 335 Pfam Formin Homology 2 Domain 1 282 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17705g00001 Trme-Chr17705 253 1342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17705g00001 1 323 FH2 protein (formin) Gene Family AT3G25500 77.399 8.41e-178 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17705g00001 - - gmx:100800333 565.844