Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17701g00001 CACGGCGGTGCTCGTGCTGCTGAGTATGTCAAACAAAACCTATTTAGTAATTTGATCAGCCATCCAAAATTCATTTCTGACACCAAATCTGCAATAGCTGATGCGTATACGCACACCGACTCTGAATTTCTGAAATCAGAAAATAATCAAAATAGAGACGCTGGATCTACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGATTGTGGCAAATGTTGGCGACTCCAGAGCTGTTATATGCAGAGGCGGAAACGCAATTGCTGTGTCCAGAGATCACAAACCAGATCAAACCGATGAGAGGCAACGGATAGAGGATGCAGGGGGATTTGTTA 334 0.4461 HGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYTHTDSEFLKSENNQNRDAGSTASTAILVGDRLIVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFV 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17701g00001 111 SMART PP2C_4 1 111 IPR001932 -
Trme17701g00001 111 Gene3D - 1 111 IPR036457 -
Trme17701g00001 111 Pfam Protein phosphatase 2C 1 111 IPR001932 -
Trme17701g00001 111 MobiDBLite consensus disorder prediction 91 111 - -
Trme17701g00001 111 CDD PP2Cc 1 111 IPR001932 -
Trme17701g00001 111 PANTHER PROTEIN PHOSPHATASE 1 111 IPR015655 GO:0004722|GO:0006470
Trme17701g00001 111 SUPERFAMILY PP2C-like 1 111 IPR036457 -
Trme17701g00001 111 ProSiteProfiles PPM-type phosphatase domain profile. 1 111 IPR001932 -
Trme17701g00001 111 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17701g00001 Trme-Chr17701 1 781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17701g00001 1 111 PP2C-type Phosphatase Gene Family AT4G31750 92.793 9.60e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17701g00001 K17506 - twl:119997938 219.55