Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17700g00001 GATATTGTCGACAAAGTTACGCGTTTACTTGACAAAACTGACTTGTTCGTTGCTGATAATCCTGTGGGAGTTGGATCTCGAGTGCAAGACATAATTCAATTTCTACACATCCAACAATCAAATAATGTTCTAATGCTAGGGATGTGGGGTATGGGGGGGATTGGTAAAACAACTATTGCAAAAGCCATTTATAATGAAATTGGCCGCAACTTCGATGGGAGGAGCTTCCTTGGAAATGTAAGAGAAGTTTGGGAGCAAACTGGCGGTCAAGTGTATTTACAAGAACAACTTTTGTTCGATATCTTCAAAGGAACCACAACCAAGATACAAAACATTGATTCCGGAAAAACTATATTAAAGGATAGACTTCGCCACAAAAGAGTACTTCTTGTTCTTGACGATGTGAGTCAATTGGAGCAACTAGATGCTTTGTGCAGTAGTCGCGAATGGTTTGGTCGAGGTAGTAGAATAATCATCACAACCAGAGATATGCATATACTTAGATGGAGTGGAGTTGACAAAGCATACACAATGAAAGAAATGGATGACACAGAATCAATTGAGCTTTTTAGTTGGCATGCATTCAAGCAAATGAGTCCCAGAGAAGATTTTGCTCGAATTTCTAGAAATGTGGTCGAGTATTGTGGGAGATTGCCACTAGCTCTAGAGGTCATTGGACGTTATTTGTTTGGTAGGAAGGTAACAGAATGGAAATGTGTACTGGAGAAACTCAAAAGAATTCCCAATAATAAAGTGCAAAATAAGTTAAAAATAAGCTATGATGGATTGGATGATGATTTCCAGAGAGCAATATTCCTAGATATAACTTGTTTCTTTATTGGGATGGACCGAAATGATGTTATATATATACTAAGTGGTTGTGAGCTTTTTCCAGAAAATGGAATAAGTGTCCTTATTGAGCGAAACCTTGTTACTATTGATGACGAAAACAGACTTGGAATGCATGATTTACTACGAGATATGGGAAGAGAAATAATTTGTGATACACCAAGAAAGGAGCCAGAGGATCGTAGTAGGTTGTGGTTTCATGAGGATGTGCTTGATGTATTATCAGCACAAACTGGAGTATGA 1092 0.381 DIVDKVTRLLDKTDLFVADNPVGVGSRVQDIIQFLHIQQSNNVLMLGMWGMGGIGKTTIAKAIYNEIGRNFDGRSFLGNVREVWEQTGGQVYLQEQLLFDIFKGTTTKIQNIDSGKTILKDRLRHKRVLLVLDDVSQLEQLDALCSSREWFGRGSRIIITTRDMHILRWSGVDKAYTMKEMDDTESIELFSWHAFKQMSPREDFARISRNVVEYCGRLPLALEVIGRYLFGRKVTEWKCVLEKLKRIPNNKVQNKLKISYDGLDDDFQRAIFLDITCFFIGMDRNDVIYILSGCELFPENGISVLIERNLVTIDDENRLGMHDLLRDMGREIICDTPRKEPEDRSRLWFHEDVLDVLSAQTGV 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17700g00001 363 PRINTS Disease resistance protein signature 45 60 - -
Trme17700g00001 363 PRINTS Disease resistance protein signature 122 136 - -
Trme17700g00001 363 PRINTS Disease resistance protein signature 215 229 - -
Trme17700g00001 363 Gene3D - 9 172 IPR027417 -
Trme17700g00001 363 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 274 IPR027417 -
Trme17700g00001 363 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 357 IPR044974 GO:0006952
Trme17700g00001 363 Gene3D - 180 264 IPR042197 -
Trme17700g00001 363 Pfam NB-ARC domain 28 260 IPR002182 GO:0043531
Trme17700g00001 363 SUPERFAMILY "Winged helix" DNA-binding domain 250 357 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17700g00001 Trme-Chr17700 61 1330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17700g00001 22 348 WRKY Transcription Factor Family AT5G45050 36.970 1.18e-60 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17700g00001 - - cam:101512894 566.229