Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme176839g00001 | ATGGAGGACGGTGAACTTGATTTCTCGAACCACGAAGTTTTTTCGAGTCCAAACATGGGTGAATTTCCGAGTAGTGGTTCAATGGATAGTTTTTTCGATGAGCTTTTGAAAGATTCGCACGCTTGTACTCATACCCACACGTGTAATCCACCGGGTCCTGATTTTTCACACACTCACACGTGTTATCATGTTCACACTAAAATTGTTCCTGCTGCTGAAGATGATCAGGTTGGTACTGATGATACTGCTGAATCTGAGAAGAAGTCGAAGAAACGGCCGGTGGGTAATAAAGAAGCGGTTAGGAAGTATCGTGAAAAGAAGAAAGCTAGGGCTGCGTCGTTGGAAGATGAGGTTATGAAATTGAGGGCTTTGAATCAGCA | 380 | 0.4368 | MEDGELDFSNHEVFSSPNMGEFPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAAEDDQVGTDDTAESEKKSKKRPVGNKEAVRKYREKKKARAASLEDEVMKLRALNQ | 126 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme176839g00001 | 126 | MobiDBLite | consensus disorder prediction | 68 | 113 | - | - | |
Trme176839g00001 | 126 | MobiDBLite | consensus disorder prediction | 81 | 102 | - | - | |
Trme176839g00001 | 126 | MobiDBLite | consensus disorder prediction | 11 | 25 | - | - | |
Trme176839g00001 | 126 | Gene3D | - | 76 | 126 | - | - | |
Trme176839g00001 | 126 | PANTHER | CCAAT/ENHANCER BINDING PROTEIN | 2 | 126 | IPR031106 | GO:0003700|GO:0006351 | |
Trme176839g00001 | 126 | CDD | bZIP | 90 | 126 | - | - | |
Trme176839g00001 | 126 | Pfam | Basic region leucine zipper | 85 | 126 | IPR004827 | GO:0003700|GO:0006355 | |
Trme176839g00001 | 126 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Trme176839g00001 | 126 | Coils | Coil | 97 | 124 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme176839g00001 | 1 | 126 | bZIP Transcription Factor Family | AT4G35040 | 73.643 | 3.26e-62 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Trme176839g00001 | bZIP_2 | 1.7e-11 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme176839g00001 | K25785 | - | gmx:778149 | 230.335 |