Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme176839g00001 ATGGAGGACGGTGAACTTGATTTCTCGAACCACGAAGTTTTTTCGAGTCCAAACATGGGTGAATTTCCGAGTAGTGGTTCAATGGATAGTTTTTTCGATGAGCTTTTGAAAGATTCGCACGCTTGTACTCATACCCACACGTGTAATCCACCGGGTCCTGATTTTTCACACACTCACACGTGTTATCATGTTCACACTAAAATTGTTCCTGCTGCTGAAGATGATCAGGTTGGTACTGATGATACTGCTGAATCTGAGAAGAAGTCGAAGAAACGGCCGGTGGGTAATAAAGAAGCGGTTAGGAAGTATCGTGAAAAGAAGAAAGCTAGGGCTGCGTCGTTGGAAGATGAGGTTATGAAATTGAGGGCTTTGAATCAGCA 380 0.4368 MEDGELDFSNHEVFSSPNMGEFPSSGSMDSFFDELLKDSHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAAEDDQVGTDDTAESEKKSKKRPVGNKEAVRKYREKKKARAASLEDEVMKLRALNQ 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme176839g00001 126 MobiDBLite consensus disorder prediction 68 113 - -
Trme176839g00001 126 MobiDBLite consensus disorder prediction 81 102 - -
Trme176839g00001 126 MobiDBLite consensus disorder prediction 11 25 - -
Trme176839g00001 126 Gene3D - 76 126 - -
Trme176839g00001 126 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 126 IPR031106 GO:0003700|GO:0006351
Trme176839g00001 126 CDD bZIP 90 126 - -
Trme176839g00001 126 Pfam Basic region leucine zipper 85 126 IPR004827 GO:0003700|GO:0006355
Trme176839g00001 126 MobiDBLite consensus disorder prediction 1 28 - -
Trme176839g00001 126 Coils Coil 97 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme176839g00001 1 126 bZIP Transcription Factor Family AT4G35040 73.643 3.26e-62 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme176839g00001 bZIP_2 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme176839g00001 K25785 - gmx:778149 230.335