Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17680g00001 ATGGTTCCCGGACACGAGATAGTGGGTGAAGTGATAAAAATCGGTCCAAATGTCAAAAAATTCAAAATTGGTGACATAGCAGGAGTGGGTCCAATATGTGGGACATGTTCCAATTGCTCCAAGGGTTGGGAGAGTTACTGCCCCAAAACAATTGCAACATACAATGGACATGACTATGATGGATCAATAACCTATGGAGGATACTCAAATAAAATAGTTGTTAATGAAAATTATGCTATTATAATTCCAAAAGGGTTACCACTAGAARGTGCAGCTCCATTGKTATGTGCTGGATTAACAGTTTATAGCCCAATGATGCATCATGGATTGTGTCAAAGTGGACAACATTTGGGTATTGTTGGATTAGGTGGACTTGGTCATGTTGCTGTTAAGTTTGCCAAGGCTTTTAACATGAAAGTTACTGTCATAAGTACTTCTCCTGGAAAGAAAGAGGAAGCTTTGGAAAGACTTGGTGCTGATTCTTTCTTGCTTATCAGTGATCAATAA 507 0.3866 MVPGHEIVGEVIKIGPNVKKFKIGDIAGVGPICGTCSNCSKGWESYCPKTIATYNGHDYDGSITYGGYSNKIVVNENYAIIIPKGLPLEXAAPLXCAGLTVYSPMMHHGLCQSGQHLGIVGLGGLGHVAVKFAKAFNMKVTVISTSPGKKEEALERLGADSFLLISDQ 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17680g00001 168 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 4 18 IPR002328 GO:0008270|GO:0016491
Trme17680g00001 168 Pfam Alcohol dehydrogenase GroES-like domain 1 80 IPR013154 -
Trme17680g00001 168 PANTHER ALDEHYDE REDUCTASE 1 168 IPR047109 GO:0016616
Trme17680g00001 168 SUPERFAMILY GroES-like 1 115 IPR011032 -
Trme17680g00001 168 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 154 IPR006140 GO:0051287
Trme17680g00001 168 Gene3D - 1 111 - -
Trme17680g00001 168 Gene3D - 112 168 - -
Trme17680g00001 168 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 89 167 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17680g00001 Trme-Chr17680 582 1404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17680g00001 1 168 Monolignol Biosynthesis Gene Families AT4G37970 57.895 8.71e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17680g00001 K23232 - tpra:123903780 317.005