Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme176801g00001 ATGATTGTTAACGAGTCACTAAGACTGTACCCACCAACAATCGCAACAATCCGACGGGCAAAAACAGACGTGGAATTAGGAGGCTATAAGATACCACGCGGAACAGAGCTTTTAATTCCAATCCTAGCCGTTCATCATGATCTAGCTATATGGGGCAACGATGTAAACGAATTCAATCCTGGCCGTTTCTCTGAAGGTGTAGCACGCGCCGCGAAACATCCAGTGGCATTCATACCTTTTGGTCTCGGTGTACGCACATGTATAGGACAAAACCTCGCAGTGCTACAAACAAAACTGGCCCTTGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTCCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAACCAATTGTCCACGCTGGATAATCCGAATCAAGA 443 0.4582 MIVNESLRLYPPTIATIRRAKTDVELGGYKIPRGTELLIPILAVHHDLAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFNQLSTLDNPNQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme176801g00001 147 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 132 - -
Trme176801g00001 147 SUPERFAMILY Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 Pfam Cytochrome P450 1 120 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS B-class P450 signature 87 98 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS B-class P450 signature 18 45 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS B-class P450 signature 1 12 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS B-class P450 signature 78 87 IPR002397 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS P450 superfamily signature 1 11 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 PRINTS P450 superfamily signature 78 87 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176801g00001 147 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 80 89 IPR017972 GO:0005506|GO:0016705
Trme176801g00001 147 Gene3D Cytochrome P450 1 140 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme176801g00001 Trme-Chr176801 1 443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme176801g00001 1 144 Cytochrome P450 AT2G26710 78.472 8.26e-82 248