Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme176481g00001 ATGACTTCGGCAATAGCAATTGAAGATGTGAGGAGGGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTGAAGTTTTATGATGCATTTGAGGATGCGAACAACGTCTACATTGTGATGGA 131 0.4122 MTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDANNVYIVM 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme176481g00001 43 SUPERFAMILY Protein kinase-like (PK-like) 4 43 IPR011009 -
Trme176481g00001 43 ProSiteProfiles Protein kinase domain profile. 1 43 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme176481g00001 43 Gene3D Phosphorylase Kinase; domain 1 1 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme176481g00001 Trme-Chr176481 156 286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme176481g00001 1 43 EF-hand Containing Proteins AT1G49580 81.395 7.75e-20 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme176481g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme176481g00001 K13412 - gmx:100794478 83.9593