Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme176423g00001 GACGAGAGGAAAAGGAAGAGGATGCTTTCGAACCGTGAATCAGCGAGACGATCGCGGATGAAGAAGCAAAAGCAGTTGGAGGATCTGAGCGATGAAGCGAACAGGTTGCAAATCGAGAACAAAAAACTGTTGGAAAGCATTAAGGCGAAGGAAGAAGCATGCATTGAAAATATAGCCGCTAATGGCGTTCTCAGAGCTCAGACTATGGAATTAACAGATCGATTACGGTTTCTTAACTCGATCCTTGAGATTGCTGAAGAAGTTAGCGGATTTTCTGTTGAGATTCCTGAAATTCCGGATCCTTTGCTTGAACCGTGGCAGATTCCTCGTCCGATTCAACCGATTATGGCGTCTGCAGATATGTTCTTGCATTGA 375 0.448 DERKRKRMLSNRESARRSRMKKQKQLEDLSDEANRLQIENKKLLESIKAKEEACIENIAANGVLRAQTMELTDRLRFLNSILEIAEEVSGFSVEIPEIPDPLLEPWQIPRPIQPIMASADMFLH 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme176423g00001 124 SMART brlzneu 1 63 IPR004827 GO:0003700|GO:0006355
Trme176423g00001 124 Gene3D - 1 59 - -
Trme176423g00001 124 FunFam BZIP transcription factor 1 52 - -
Trme176423g00001 124 MobiDBLite consensus disorder prediction 1 31 - -
Trme176423g00001 124 Pfam bZIP transcription factor 3 54 IPR004827 GO:0003700|GO:0006355
Trme176423g00001 124 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 120 - -
Trme176423g00001 124 CDD bZIP_plant_GBF1 4 54 IPR045314 GO:0003700|GO:0006355
Trme176423g00001 124 Coils Coil 12 53 - -
Trme176423g00001 124 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 48 IPR004827 GO:0003700|GO:0006355
Trme176423g00001 124 SUPERFAMILY Leucine zipper domain 3 51 IPR046347 GO:0003700|GO:0006355
Trme176423g00001 124 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 6 21 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme176423g00001 Trme-Chr176423 1 375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme176423g00001 1 122 bZIP Transcription Factor Family AT3G62420 60.656 7.49e-47 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme176423g00001 bZIP_1 2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme176423g00001 K25786 - gmx:778144 198.364