Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme176243g00001 AATATATATACACCATTTGGAGGAGGGCCGCGGCTGTGCCCTGGCTATGAGCTAGCCAGAGTTGTGCTATCGGTATTTCTTCACCGCATTGTCACTCGTTACAGTTGGTCTCCTGCAGAAGAAGATAAGTTGGTGTTTTTCCCAACCACTCGGACGCAGAAGAGGTATCCTATCCTAGTGAAGCGTAGAGTGCAATCGAATTCAGTCATGTAA 213 0.4742 NIYTPFGGGPRLCPGYELARVVLSVFLHRIVTRYSWSPAEEDKLVFFPTTRTQKRYPILVKRRVQSNSVM 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme176243g00001 70 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 6 15 IPR017972 GO:0005506|GO:0016705
Trme176243g00001 70 PANTHER CYTOCHROME P450 26 3 45 - -
Trme176243g00001 70 Gene3D Cytochrome P450 1 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176243g00001 70 Pfam Cytochrome P450 3 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme176243g00001 70 SUPERFAMILY Cytochrome P450 3 63 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme176243g00001 Trme-Chr176243 59 359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme176243g00001 1 63 Cytochrome P450 AT5G05690 85.714 1.31e-36 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme176243g00001 K09588 - gmx:100781291 132.88