Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1760g00001 ATGGAAGGAGAAAGTAACAAAGGGAGTTGGGTACCAAACACTCCTACACTCGGTGGTAGCAGCAGCTTTAATGATTCAGGAAAAGCTGATTGTTTTCTTGATCTGATTGACAAAGTAGAAAAACATAGGAATACAAAGCTATTTCCAATACAACTTGATCTAATAGGAAGAGCTGTTACACCTTCTATTCCAAACTCGGAGCGACGCAAGCTACAAATTGCCAATAGTCTCAAAGCCCTCCATGAATTGCTACCGAATACAGAAGTGGGTAGTCAAGCTCACATATTGGATGATGTCATTGACTATGTTCAATACTTGCAGAATCAAGTAAAGGAACTGTGTGGGAGTAAATTGCAAGCTGATTCAAATGCTACACCATTAGTTTTCCACGAG 393 0.3995 MEGESNKGSWVPNTPTLGGSSSFNDSGKADCFLDLIDKVEKHRNTKLFPIQLDLIGRAVTPSIPNSERRKLQIANSLKALHELLPNTEVGSQAHILDDVIDYVQYLQNQVKELCGSKLQADSNATPLVFHE 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1760g00001 131 CDD bHLH_AtbHLH_like 63 113 IPR045239 -
Trme1760g00001 131 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 106 IPR011598 GO:0046983
Trme1760g00001 131 SMART finulus 64 112 IPR011598 GO:0046983
Trme1760g00001 131 MobiDBLite consensus disorder prediction 1 22 - -
Trme1760g00001 131 MobiDBLite consensus disorder prediction 7 22 - -
Trme1760g00001 131 Gene3D - 65 120 IPR036638 GO:0046983
Trme1760g00001 131 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 116 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1760g00001 Trme-Chr1760 649 1711 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1760g00001 56 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G58010 39.437 3.70e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1760g00001 - - cam:101507064 102.064