Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1757g00001 ATGTCGAAATATGTTGATAGATCTTACGGAGTTGAAATAGACGAAAAGCAAAGTGTGCCTATTGATCTAAAGGAGTCGATCCGAGTCCTTTCTAAACTTCGAGAAGCACCTTGGCATTACGCAGAAAGTACTAGAGAACTTCCGAGATCGTCACATGAAGTAAAAGATGGACACTGGAATTCAGTCTCGAAGGATGCTCCTTGGTTAGCTTATGACGGAAGAGAAACGAGTCGTTTATCTTTTGAATCGCGAGAGACGATCAAATCCACACCAAAGCTAAAAGAGTTTCCTAGGCATTCACTGGATAGTAAGGAAGGTTCGTGGCGCACTTATAACTCCGATTCAAAGCCTAGCAACATCTCAAGAAACGTTTACAGTGCCACCTCTACCTCCAATGAAAAATTCTCTAGTCAACAACAGTCTTCATCAACACAGAATCGGTTGCCGAGTGTTGTCGCAAAACTAATGGGCTTGGAAGCATTGCCTGATTCCTCTTCGGCCGGTGATACTCAATCAGGTTCAACTGAAACTTACTCCGCTCAAGATAACGGCCAGTTTCCAAGATCATCGAAAAATGGATTCATTAGACCTCTTCGAGTTTCCAACTCTCCGAAAATCTCATTGAAAGATCCAACTTCCCCTAGGCGGAAGAATCCTGATGTGGTTATGAAACCGGTCTCCAGTTCAAAGTTTCCGATTGAACCAGCACCATGGAAGCAGCATGATGCAAATAGAAACTCTCAGAAACAAATTTTAAGGACAACAAAAGTTCCATTAAGAACACAAGATTCATTTCCTTCGGTTTATAGTGAGATAGAGAAGCGATTGAAGGACCTTGAATTCAAACAATCCGGAAGGGATCTTAGAGCACTAAAGCAGATACTGGAAGCAATGCAAGAAAAGGGACTGTTAGAGAGCCGAAAAGAAGAACAAGTTCCAAACGTAGTTGGAAGTCGAAGTGACTATGAGCCTAAAGCTAGCAATCTAAATCAGAATTCAAGGTCGGTAAAGCAACAAAATCCTCAGAGAAACAATTTTTTGTCTTCTACAATCAAGGGAAATGATTCCACAAGAGCTTTTGATTCTCCAATAGTGATAATGAAACCGGCAAAACTTGTGGAGAAATCTGAGATTTCTGCTTCTTCAGCTATTCCAATTGGTGGCTTTTCTGGTTCCAATAATAGAAACAACATATCTTCTACTCTACTCGCAAAAGAACAGTCTCCAAAGAATATTCGGAGGGACGCTTCTCCGAGTTCCACCGATAAGAAAACAAGTATTACAAAGACTACTAGATCTTTACAATCTCAATCAAGGTCAAACCAATTTCCAAAAGAAAGCCAAAGTTCAGCGAAGAGTTCAGGATCAGTGAGTCCAAGATTGCAACAGAAGAAGTTGGAGTTAGAGAAGCGATCTCGTCTGCCTACACCGCCATCAGATTCAAACAAACCAAGAAGGCAGTCCAGTAAAAAGGCAGCGGAATCAGTTTCTCCAAGTGGAAAAGTACGACACAAAACTGTCAACTCACAGAACAGCGAAGAGCAACTGAGTGAGATAAGCAATGATTCTAGAAGTTTTTACCAAGGGGATGAAATTTCTCTTCAATCTGATAGCATTACCGTTGACTCGAAATTGGATATTGAAGTCACTAGTAGTTTACGGTCTTCTGAAATTGATGACAGCCAAAGTCCATCGTTGAAGGCTATGAAGAAATTGGTTTCAGAAACAGTTCAGAAAAAATCAACACCAAGGTTGGATCAAGATGAGACAATTGCAGAACTTGCATCTATGGGCCCGGAACATCCAAGTCCTAACTCCGTTCTTGATGGATCGGTATACAAAGATGACATGCAATCACCAGTAATGGAGACACCTAAAGATCCAAAAGCTGGTAATGCTCAAGAATCGAAAGATAATGAGGTCAAAGATCAATGGAAGCCTGATGACAACCTTTCATTTAACAGCACAGGATCTGGAGAGATCAATCGTAAGAAATTACAAAGCATAGATCATCTTGTTCAGAAGCTTAGACGACTGAACTCCAATCACGATGAAGCTAGAAACGATTACATTGCTTCCTTATGCGAAAACTCAAATCCAGACCACAGATACATATCTGAAATACTACTAGCCTCAGGTCTCTTACTCAGAGACCTGAATTCTGAATTTTTGACATTTCAACTACACTCGTCGGGTCATCCTATTAACCCAGAGTTATTCCTTGTCTTGGAGCAAACCAAGGCAAGTAGTTTGCTTTCGAAAGAAGAAAGCAGCTTTGGTGAAAAAGCTGCTTTCTCGAAGCAAACTACGGAGAAATTTCACCGAAAACTCATCTTTGATGCCGTGAACGAAATTCTTGTTGCAAAACTAGGTTACTCTCCTGAGCCATGGTTTCAACCTAACAAACTCACAAAGAAAAACCTCAGTTCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAAAAAGTTCAAGCCAAGAAAACTGAATGCTGCTTAGAAGATGATGAAGAGGATGATAGTCTAAAAAGCATGTTGTGTGAAGATGTGATACATGGTTCAGTATGTTGGGAAGATTTCAATGGTGAAATACCTGGAATTGTGTTGGATGTTGAGAGATTGATATTTAAGGATTTGGTAAATGATATTGTGATCGGTGAAGCATCTGGTTTGCGA 2676 0.404 MSKYVDRSYGVEIDEKQSVPIDLKESIRVLSKLREAPWHYAESTRELPRSSHEVKDGHWNSVSKDAPWLAYDGRETSRLSFESRETIKSTPKLKEFPRHSLDSKEGSWRTYNSDSKPSNISRNVYSATSTSNEKFSSQQQSSSTQNRLPSVVAKLMGLEALPDSSSAGDTQSGSTETYSAQDNGQFPRSSKNGFIRPLRVSNSPKISLKDPTSPRRKNPDVVMKPVSSSKFPIEPAPWKQHDANRNSQKQILRTTKVPLRTQDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKEEQVPNVVGSRSDYEPKASNLNQNSRSVKQQNPQRNNFLSSTIKGNDSTRAFDSPIVIMKPAKLVEKSEISASSAIPIGGFSGSNNRNNISSTLLAKEQSPKNIRRDASPSSTDKKTSITKTTRSLQSQSRSNQFPKESQSSAKSSGSVSPRLQQKKLELEKRSRLPTPPSDSNKPRRQSSKKAAESVSPSGKVRHKTVNSQNSEEQLSEISNDSRSFYQGDEISLQSDSITVDSKLDIEVTSSLRSSEIDDSQSPSLKAMKKLVSETVQKKSTPRLDQDETIAELASMGPEHPSPNSVLDGSVYKDDMQSPVMETPKDPKAGNAQESKDNEVKDQWKPDDNLSFNSTGSGEINRKKLQSIDHLVQKLRRLNSNHDEARNDYIASLCENSNPDHRYISEILLASGLLLRDLNSEFLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSFGEKAAFSKQTTEKFHRKLIFDAVNEILVAKLGYSPEPWFQPNKLTKKNLSSQKLLKELCFEIEKVQAKKTECCLEDDEEDDSLKSMLCEDVIHGSVCWEDFNGEIPGIVLDVERLIFKDLVNDIVIGEASGLR 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1757g00001 892 MobiDBLite consensus disorder prediction 491 524 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 106 150 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 80 246 - -
Trme1757g00001 892 Coils Coil 669 689 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 80 105 - -
Trme1757g00001 892 PANTHER LONGIFOLIA PROTEIN 16 889 IPR033334 GO:0051513
Trme1757g00001 892 MobiDBLite consensus disorder prediction 164 190 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 402 524 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 421 461 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 595 659 - -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 321 354 - -
Trme1757g00001 892 Pfam Domain of unknown function (DUF4378) 701 882 IPR025486 -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 630 647 - -
Trme1757g00001 892 Pfam DUF761-associated sequence motif 136 166 IPR032795 -
Trme1757g00001 892 MobiDBLite consensus disorder prediction 306 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1757g00001 Trme-Chr1757 14 2934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1757g00001 7 892 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 46.681 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1757g00001 - - gmx:100787391 1287.71