Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17572g00001 GTCACCTTCTTTTCCAACCGGCCAGAGAGGAGTTCTCAGCTGCTTCAGCAGCCTGAAGTCATTACAGCCACTGTTGAAGAAGTTTCCTCAAGTGCAAGGCCTCTAGTTAGACAACTAAAGGAACTCCCCAATAGAATTAAGAAAGTTATTGCATCATTACCTGATCAAGAGGTGAATGACGAGGAAGCCTCCCTCCTTGACATGCTCTGGCTATTACTTGCAAGTGTTATATTTGTTCCGCTGTTTCAAAAAATTCCTGGAGGCAGTCCTGTTCTTGGTTACTTGGCTGCTGGAATCTTGATTGGGCCTTATGGACTCTCCATCATTCGCAATGTTCACGGGACAAAATCAATCGCCGAATTTGGAGTTGTTTTCCTATTATTTAATATTGGTCTGGAGGTGGAGCTTCACATAAGATCTTGTTGTACCATGACTTAA 438 0.4338 VTFFSNRPERSSQLLQQPEVITATVEEVSSSARPLVRQLKELPNRIKKVIASLPDQEVNDEEASLLDMLWLLLASVIFVPLFQKIPGGSPVLGYLAAGILIGPYGLSIIRNVHGTKSIAEFGVVFLLFNIGLEVELHIRSCCTMT 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17572g00001 145 Pfam Sodium/hydrogen exchanger family 71 136 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme17572g00001 145 Gene3D - 61 140 IPR038770 -
Trme17572g00001 145 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 15 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17572g00001 Trme-Chr17572 242 1388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17572g00001 4 134 Inorganic Solute Cotransporters AT1G01790 74.809 2.16e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17572g00001 K03455 - lja:Lj0g3v0318719.2 225.713