Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17564g00001 GATAAACCTCCTGATTGGCAAGACTTTGTTGGAATTATCACACTCCTTATTATCAATTCAACTATAAGTTTCATCGAGGAGAACAATGCTGGTAATGCTGCCGCTGCTCTCATGGCTCGCCTAGCACCTAAAGCTAAGGTTCTTCGAGATGGGAAATGGGTGGAGGAAGATGCTAGTATTCTTGTTCCCGGCGATATAATTAGTGTTAAGCTAGGCGATATTATCCCTGCAGATTCTCGTTTACTTGAAGGTGATCCATTGAAGATTGATCAGTCTGCACTTACAGGTGAGTCTCTTCCAGTCACGAAAGGACCTGGCGATAGCGTTTATTCCGGCTCTACATGCAAGCAGGGAGAGATAGAAGCTGTTGTTATTGCAACAGGAGTTCATACCTTCTTTGGCAAGGCTGCTCATCTAGTTGACTCCACAAATCAAGTTGGTCATTTTCAAAAGGTCCTAACTTCAATAGGGAACTTTTGCATATGTTCAATTGCCGTGGGAATGATAATTGAGATCATTGTCATGTATCCAATTCAACACCGGAAATATCGTCCTGGGATTGACAATCTACTTGTGCTCCTCATTGGAGGAATTCCTATTGCCATGCCTACTGTTTTGTCGGTGACAATGGCCATCGGATCCCACCG 647 0.4374 DKPPDWQDFVGIITLLIINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWVEEDASILVPGDIISVKLGDIIPADSRLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTSIGNFCICSIAVGMIIEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17564g00001 216 PANTHER CALCIUM-TRANSPORTING ATPASE 5 216 - -
Trme17564g00001 216 Pfam E1-E2 ATPase 41 215 - -
Trme17564g00001 216 Gene3D - 9 144 - -
Trme17564g00001 216 NCBIfam HAD-IC family P-type ATPase 12 214 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trme17564g00001 216 SUPERFAMILY Calcium ATPase, transduction domain A 43 140 IPR008250 -
Trme17564g00001 216 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 216 IPR023298 -
Trme17564g00001 216 FunFam Plasma membrane ATPase 43 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17564g00001 Trme-Chr17564 316 1427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17564g00001 2 216 Primary Pumps ATPases AT5G62670 92.093 4.37e-129 385