Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme175552g00001 ATGGCAGAACTAGATACCCGTAGAAGCGAGATCTTAGGAAAGTCAGCAAGTATTATTCAGAGGAAAGTTCGTTCATATTTGGCACGTCGAAGTTTCGTTTCGCTTCGTTTGTCAGCTGTGCAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGGCAAGTTTTCGAGGGAATGCAACGAGAGGCTTCTAGTCTTCTTATTCAAAGGTATTTCCGCATGCATATTGCTAGGAAAGCGTATAAAGAATTGTATGCCTCTGCTGTCTCGATCCAGACTGGTATGCGGGTGATGGCTGCTAGGCGTGAGCTACACTTTAGAAGGAGGACTAGTGCAGCAATTGTCATTCAGGTA 351 0.4558 MAELDTRRSEILGKSASIIQRKVRSYLARRSFVSLRLSAVQIQAACRGQLARQVFEGMQREASSLLIQRYFRMHIARKAYKELYASAVSIQTGMRVMAARRELHFRRRTSAAIVIQV 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme175552g00001 117 ProSiteProfiles IQ motif profile. 60 89 IPR000048 GO:0005515
Trme175552g00001 117 FunFam unconventional myosin-Va 62 110 - -
Trme175552g00001 117 Pfam IQ calmodulin-binding motif 14 32 IPR000048 GO:0005515
Trme175552g00001 117 Pfam IQ calmodulin-binding motif 63 81 IPR000048 GO:0005515
Trme175552g00001 117 Pfam IQ calmodulin-binding motif 38 55 IPR000048 GO:0005515
Trme175552g00001 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 62 IPR027417 -
Trme175552g00001 117 ProSiteProfiles IQ motif profile. 35 64 IPR000048 GO:0005515
Trme175552g00001 117 PANTHER MYOSIN 1 114 - -
Trme175552g00001 117 FunFam Myosin XI D 12 61 - -
Trme175552g00001 117 SMART iq_5 11 33 IPR000048 GO:0005515
Trme175552g00001 117 SMART iq_5 82 104 IPR000048 GO:0005515
Trme175552g00001 117 SMART iq_5 34 56 IPR000048 GO:0005515
Trme175552g00001 117 SMART iq_5 59 81 IPR000048 GO:0005515
Trme175552g00001 117 Gene3D - 62 114 - -
Trme175552g00001 117 Gene3D - 12 61 - -
Trme175552g00001 117 ProSiteProfiles IQ motif profile. 14 41 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme175552g00001 1 117 Myosins gene family AT5G43900 68.376 6.07e-48 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme175552g00001 K10357 - gmx:100791070 189.119