Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme175468g00001 GTTCTTCTAAGAGGCCCAAAGAATTCTCGTGAAGCAGTGAAACACTTTGGTCGTGCTCCTGGTGTGCCACACAGCCATACCAAGCCTTATGTAAGAGCAAAGGGAAGGAAATTTGAGAAGGCTAGAGGAAAGAGGAACAGCAGAGGATTTAGGGTTTGA 159 0.4654 VLLRGPKNSREAVKHFGRAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme175468g00001 52 PANTHER 60S RIBOSOMAL PROTEIN L18 1 52 IPR000039 GO:0003735|GO:0005840|GO:0006412
Trme175468g00001 52 Pfam Ribosomal protein 60S L18 and 50S L18e 1 52 IPR021131 -
Trme175468g00001 52 Gene3D - 1 52 - -
Trme175468g00001 52 MobiDBLite consensus disorder prediction 1 28 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme175468g00001 1 52 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 92.308 2.36e-29 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme175468g00001 K02883 - csav:115716685 107.071