Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme175298g00001 ATGATGAAATTTGCAGAACTAATTGATGAAAACATAGAAGAACTAGCAGCATTAGATGCAATTGATGCTGGAAAGTTGTACTATATTGCCAAGGTTATGGAAATTCCTGGATCAATAAGTACGCTACGTTACTATGCTGGTGCTGCTGATAAAATTCATGGCGAGGTATTAAAAAGTTCTGGCCAATTCCACGCGTACACGTTAATGGAACCGATTGGTGTTGTGGGACATATAATTCCATGGAATGCTCCTACTTCAATTTTCTTCACCAAAGTTGCTCCTTCTTTAGCTGTTGGGTGCACTATGGTGCTCAAACCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCCCATCTAGCTAAACTG 369 0.4011 MMKFAELIDENIEELAALDAIDAGKLYYIAKVMEIPGSISTLRYYAGAADKIHGEVLKSSGQFHAYTLMEPIGVVGHIIPWNAPTSIFFTKVAPSLAVGCTMVLKPAEQTPLSALFYAHLAKL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme175298g00001 123 SUPERFAMILY ALDH-like 2 121 IPR016161 GO:0016491
Trme175298g00001 123 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 123 IPR016162 GO:0016491
Trme175298g00001 123 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 122 - -
Trme175298g00001 123 Pfam Aldehyde dehydrogenase family 1 122 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme175298g00001 Trme-Chr175298 87 455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme175298g00001 3 122 Aldehyde Dehydrogenase Gene Family AT3G24503 66.942 1.68e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme175298g00001 K12355 - gmx:100527654 209.534