Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme175297g00001 ATGGATGTTGAAGCCTTGAAGAAGCTTAACAARAATAAGAAGTTGGTGAAGAAACTAGCCAAGAAGTATCATGCYTTCTTAGCTTCTGAGGCTGTCATTAAGCAGATTCCTCGTCTTTTGGGTCCTGGTCTCAACAAGGCAGGCATGTTTTTTTCCCTTG 160 0.4125 MDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGMFFSL 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme175297g00001 53 Gene3D - 1 53 IPR016095 -
Trme175297g00001 53 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 1 46 - -
Trme175297g00001 53 Pfam Ribosomal protein L1p/L10e family 2 48 IPR028364 -
Trme175297g00001 53 SUPERFAMILY Ribosomal protein L1 1 50 IPR023674 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme175297g00001 Trme-Chr175297 147 306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme175297g00001 1 53 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 90.566 1.02e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme175297g00001 K02865 - fve:101309699 77.4109