Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme175271g00001 ATGTACAAACGTAGATTCAACACCAAACCAGTGTATGTCGCTGACCCAGATGAGCACGAGCTTGAGCCTAAACCCGAGCTCATCTCAGAAGCTGGGCCAGCTTCTCCTTCTTCTTGTGAAGACACAAAAATTGAAGAACCATCACCCAAGAAAAGGAGGGAGATGAAGAAAAGAGTAGTTACTATACCGATCGGTGACGTGGAAGGATCTAAGAGCAAAGGAGAGACATTTCCACCGTCGGATTCATGGGCTTGGAGAAAGTACGGTCAAAAGCCCATTAAAGG 284 0.4648 MYKRRFNTKPVYVADPDEHELEPKPELISEAGPASPSSCEDTKIEEPSPKKRREMKKRVVTIPIGDVEGSKSKGETFPPSDSWAWRKYGQKPIKG 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme175271g00001 95 MobiDBLite consensus disorder prediction 1 95 - -
Trme175271g00001 95 ProSiteProfiles WRKY domain profile. 80 95 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme175271g00001 95 MobiDBLite consensus disorder prediction 43 61 - -
Trme175271g00001 95 MobiDBLite consensus disorder prediction 10 26 - -
Trme175271g00001 95 Gene3D WRKY domain 52 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme175271g00001 95 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 20 95 IPR044810 GO:0003700
Trme175271g00001 95 SUPERFAMILY WRKY DNA-binding domain 75 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme175271g00001 26 95 WRKY Transcription Factor Family AT3G58710 71.429 1.85e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme175271g00001 - - cam:101504205 172.94