Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17522g00001 ATGTTTCTATTTGTGAAAGTATTGATTAAACCTACTTACGATGAACTTGGTCGAGTTCTAGAACAACTGCAGCCGGATTTTGTTTACCTGCAAGGTCAGCAGCTAGATGATAGGGGAGAAATCGGGTCTCTTGTATGGGAAGATTTTGACTTGTCTACCCCAGAAGCCTTGTGTGGATTATTTTCTTCCAAATTACCTAATACTGTTTATTTGGAAACTCCCAAAGGCGAAAAATTGGCAGAGGCACTCCATTCTGAGTATGCAGCTTCACATTTTAATCAAGCTTTTTTCTCAGTGGCACAAAGTACATCCAGCCATACATGGGATGCTTTCCAACTTGCTCAAGCATCTTTTAGACTATACTGTGCGCAAAACAATGTTGTATCGCACAACAGTCGGACGGGCGGCAGTAAGCTTGGGCCACAAATTCTTGGGGAACCTCCTAACATAGAAGTTGGTCCATGTGAAGCAAACACGAAGGAAGAAGAAGAAGATTCACCTGAGACTAGTTCTTCTATAAAGATATATGATGATGATGTGAATAC 545 0.4128 MFLFVKVLIKPTYDELGRVLEQLQPDFVYLQGQQLDDRGEIGSLVWEDFDLSTPEALCGLFSSKLPNTVYLETPKGEKLAEALHSEYAASHFNQAFFSVAQSTSSHTWDAFQLAQASFRLYCAQNNVVSHNSRTGGSKLGPQILGEPPNIEVGPCEANTKEEEEDSPETSSSIKIYDDDVNT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17522g00001 182 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 5 181 IPR042293 -
Trme17522g00001 182 MobiDBLite consensus disorder prediction 133 182 - -
Trme17522g00001 182 MobiDBLite consensus disorder prediction 156 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17522g00001 Trme-Chr17522 1 1406 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17522g00001 3 180 ARID Transcription Factor Family AT3G43240 47.423 7.29e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17522g00001 - - vvo:131631108 288.885