Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme174985g00001 ATGTTCATTGGGAGCTACATAGTGGCATTAGCATTGTTATGGAGATTAGCAATTGTTGGAATCCCTTTTGTTGTTCTACTTGTGGTTCCTGGTTACATGTATAAGAGAACATTGATGAGGTTAGCTAGAAAGATTAGAGAAGAGTACAATCAAGCTGGTACAATAGCAGAACAAACAATATCTTCAATAAGAACTGTTTATTCCTTTGTAGGAGAAAGCAAAACCATAGCTGCCTTTTCTAATGCTTTAGAAGGATCAGTTAAGTTGGGATTGAAACAAGGATTAGCTAAAGGCTTAGCCTTAGGAAGCAATGGTGTTGTTTATGCTATGTGGTCTTTAATATGCTATTATGGAAGCAGAATGGTCATGTATCATGGTGCTAAAGGTGGTAATGTATTTGCAGTTGGAGCATTATTAGCACTTGGTGGATTGTAA 435 0.3678 MFIGSYIVALALLWRLAIVGIPFVVLLVVPGYMYKRTLMRLARKIREEYNQAGTIAEQTISSIRTVYSFVGESKTIAAFSNALEGSVKLGLKQGLAKGLALGSNGVVYAMWSLICYYGSRMVMYHGAKGGNVFAVGALLALGGL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme174985g00001 144 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 144 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Trme174985g00001 144 PANTHER ABC TRANSPORTER B FAMILY 1 143 IPR039421 -
Trme174985g00001 144 SUPERFAMILY ABC transporter transmembrane region 1 139 IPR036640 GO:0005524|GO:0016020
Trme174985g00001 144 Gene3D ABC transporter type 1, transmembrane domain 1 144 IPR036640 GO:0005524|GO:0016020
Trme174985g00001 144 Pfam ABC transporter transmembrane region 1 139 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme174985g00001 Trme-Chr174985 12 446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme174985g00001 2 144 Calmodulin-binding Proteins AT2G36910 40.972 1.54e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme174985g00001 K05658 - cave:132181353 205.297