Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme174495g00001 ATGTACTACCATGTGTACACCCAGTTCGTCCGCTCCACTCGATCTATTTGTGTGTCTCCATTCCTCCGACGAGCACCAGAACACCGTCTTCCTGCTGCCATTGAGGATGGATTTGCAACNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTGACCCATGGCTTGAGGAACACGGCGACTTCAACAAAATTTTCCTCATTGGAGATAGCTCAGGAGGAAACTTAGTCCACGAAGTAGCAGCTAGAGCTGGTTCGGTCGACTTGAGTCCAATTCGGCTTGCTGGAGCAATTCCAATCCATCCTGGGTTTGTTAG 320 0.4375 MYYHVYTQFVRSTRSICVSPFLRRAPEHRLPAAIEDGFATXXXXXXXXXXXXXDPWLEEHGDFNKIFLIGDSSGGNLVHEVAARAGSVDLSPIRLAGAIPIHPGFV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme174495g00001 106 Pfam alpha/beta hydrolase fold 6 104 IPR013094 GO:0016787
Trme174495g00001 106 SUPERFAMILY alpha/beta-Hydrolases 2 105 IPR029058 -
Trme174495g00001 106 Gene3D alpha/beta hydrolase 1 106 IPR029058 -
Trme174495g00001 106 PANTHER ARYLACETAMIDE DEACETYLASE 2 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme174495g00001 Trme-Chr174495 124 443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme174495g00001 1 105 Carbohydrate Esterase AT1G49660 35.238 6.17e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme174495g00001 - - gmx:100806530 165.622