Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme174483g00001 CGCCAGAAGAAGGCCGTTAAGATTTTCCCTAAGCCTACTGCTGGACCTCTTAGACCTGTTGTTCATGGTCAGACAGTGAAATACAACATGAAACTCAGAGCTGGGAAAGGGTTTTCTCTTGAAGAGTTGAAGGTAAAATGA 141 0.4397 RQKKAVKIFPKPTAGPLRPVVHGQTVKYNMKLRAGKGFSLEELKVK 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme174483g00001 46 PANTHER 60S RIBOSOMAL PROTEIN L13 1 45 IPR001380 GO:0003735|GO:0005840|GO:0006412
Trme174483g00001 46 Pfam Ribosomal protein L13e 1 44 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme174483g00001 Trme-Chr174483 206 346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme174483g00001 1 45 Cytoplasmic Ribosomal Protein Gene Family AT5G23900 88.889 1.14e-24 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme174483g00001 K02873 - twl:119995975 89.7373