Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme174420g00001 GGCTCTAAATATTGGGGTAAAGGGATTGCAACGTGTGCTGTGAAACAAATTGTTAAGGCTGCTTTCAGTGAAATGTCACGCTTGGAAAGGCTTGAAGCCCTTGTTGATGTGGAAAATGTTGGGTCTCAAAGAGTGTTGGAGAAAGCTGATTTCCAAAAGGAGGGAGTTCTCATGAAGTATTTGTTCATGAAAGGAAAAAGCGGAGATATGATCATGTTCAGTGTTCTTTCAACTGATCTTCAGCTATGA 249 0.4096 GSKYWGKGIATCAVKQIVKAAFSEMSRLERLEALVDVENVGSQRVLEKADFQKEGVLMKYLFMKGKSGDMIMFSVLSTDLQL 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme174420g00001 82 Pfam Acetyltransferase (GNAT) domain 2 52 IPR000182 GO:0016747
Trme174420g00001 82 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 77 IPR000182 GO:0016747
Trme174420g00001 82 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 76 IPR016181 -
Trme174420g00001 82 Gene3D - 1 81 - -
Trme174420g00001 82 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme174420g00001 Trme-Chr174420 2 250 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trme174420g00001 Acetyltransf_3 9.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme174420g00001 - - tpra:123896460 134.806