Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme174198g00001 GCCATGCTCCTTGCTGGTACTGATACAACAGCTGGCACTTTAGAGTGGTCGATGTCTAATATTTTGAACCATCCAGAGGTATTGAAGAAGGTAAGAGATGAATTGGATACTCACGTAGGCGAACATCGTTTGGTAGATGAATCAGACCTTCCAAAACTCACTTACCTTAAAAATGTTATCAATGAGACACTTCGATTATACCCTCCTGCTCCTTTGTTATTACCMCACTCGAATTCAGAAGTGTGTGTTATTGGAGGATACAAAGTACCACAAAACACTATAGTATTGATTAATGTTTGGGCTATTCAAAGAGACCCCAAAATATGGAGTGAAGCCACAACTTTTAAACCCGAGAGGTTCGACAAAAAAGAAGAGTCCGAGAAGTTGATTGCGTTTGGAATTGGAAGAAGGGCTTGTCCAGGAGAAACCTTGGC 434 0.4101 AMLLAGTDTTAGTLEWSMSNILNHPEVLKKVRDELDTHVGEHRLVDESDLPKLTYLKNVINETLRLYPPAPLLLPHSNSEVCVIGGYKVPQNTIVLINVWAIQRDPKIWSEATTFKPERFDKKEESEKLIAFGIGRRACPGETLA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme174198g00001 145 SUPERFAMILY Cytochrome P450 2 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS E-class P450 group I signature 129 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS E-class P450 group I signature 139 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS P450 superfamily signature 130 139 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PRINTS P450 superfamily signature 139 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 132 141 IPR017972 GO:0005506|GO:0016705
Trme174198g00001 145 Gene3D Cytochrome P450 1 145 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 Pfam Cytochrome P450 2 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme174198g00001 145 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme174198g00001 Trme-Chr174198 57 490 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme174198g00001 1 145 Cytochrome P450 AT4G37370 60.690 6.91e-65 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme174198g00001 K13260 - ag:BAA22422 243.817