Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17405g00001 ATGACTGATGATGTTATGGCCAAACGTGTTCCTCTTTTGTGTCTCCAAATTGCTTATGATCTTTTGGTGTCTCGTTTTTTCTACTTCATCCTCAAGCCTATTCGTGTGCCCCTCATTGTTGCGCAAATATTGGCTGGCTTTTCTCTGAGTCCAACTCTCTTGGGAAATTTCAAACCGATATTTGACTTGTTTTACGATCAACAAGGTATCCTAGCCATTGAAACCTTTGCAAACTTGGGRATATTGTACTATGTGTTCTTAAGTGGTTTAGAAATGAATTCAGACGTAATYTTAAGATCRAGAAAAAAAGGTACAAGCATAGCAGTTGTTGGCATTGTGACATCAATGTTATTTGGTGTTGGATTGCTTACTGTACAACACAAACTTGAAGATGAAAATGATACTTTCTCACTAACACCTAAAGAAAATCACAATGAAGCCTATTTATTTTGGTGTTTAGCACTTTCTGTCACAGGTTTCCCGGTCCTTGCAAGAATCTTAGCTAAGCTAAAGCTTTTGTATACAAAGCTTGGAAAAGATGCATTAACAGCAGCTATGTTAACTGATGCATATGGTTGGGTTTTATTCACATTGTTGATTCCTTATTCTAATATTGGTGGAAAGCCTCTTCTCTCAGTAATCAGTACCTTGTTGTTCATAGTTTTTTGTTTTACTGTGGTGAGACCTATCCTTACTCCAATCATTGAAAAGAAAACAAGTGCGAACACATGGCGCAAGTCGCAATTGTTGGACTTGTTAATGGGAGTGTTTATTTGTTCATTTATTACAGATTGTCTTGGTACGCATCCTATTGTTGGAGCTTTTGTGTTTGGATTGATTTTGCCTCATGGGAAGTTTGCTGTTATGGTTATGGAAATGTCAGATGATTTTGTTTCTGGGATTTTATGTCCTGTCTTCTTTGCTGGATTTGGTTTTAGACTCAACATGCCTTTTCTTTTGAAGCAAGACTCTGCAGGTTTAATGATGTTGATTGCGGTTTTGTTATGCATACCAAAAGTTTTGAGCTCTTTGATTGTCACTTTTTTCTTCGGTATGCCTGCTCGAGATGGCCTTGCCATTGGTTTGCTTCTCAACACCAAGGGCGTCATGGCTATCATACTACTAAATGTTGCTTGGGACAAAAAG 1146 0.377 MTDDVMAKRVPLLCLQIAYDLLVSRFFYFILKPIRVPLIVAQILAGFSLSPTLLGNFKPIFDLFYDQQGILAIETFANLGILYYVFLSGLEMNSDVILRSRKKGTSIAVVGIVTSMLFGVGLLTVQHKLEDENDTFSLTPKENHNEAYLFWCLALSVTGFPVLARILAKLKLLYTKLGKDALTAAMLTDAYGWVLFTLLIPYSNIGGKPLLSVISTLLFIVFCFTVVRPILTPIIEKKTSANTWRKSQLLDLLMGVFICSFITDCLGTHPIVGAFVFGLILPHGKFAVMVMEMSDDFVSGILCPVFFAGFGFRLNMPFLLKQDSAGLMMLIAVLLCIPKVLSSLIVTFFFGMPARDGLAIGLLLNTKGVMAIILLNVAWDKK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17405g00001 382 PANTHER CATION/H + ANTIPORTER 4 378 - -
Trme17405g00001 382 Gene3D - 12 382 IPR038770 -
Trme17405g00001 382 Pfam Sodium/hydrogen exchanger family 23 378 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17405g00001 Trme-Chr17405 48 1387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17405g00001 29 382 Antiporter Super Family AT2G13620 39.276 8.82e-74 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17405g00001 - K26731 psat:127112544 607.06