Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme173780g00001 TTCACGGGCGGGGACACTGGAATAGCAATATCAAAGAAGTCTTCAATGATTCCTCTTCAAATGGAGCTAGGTGGAAAAGATGCATGCATTGTTCTTGAAGATGCTGACTTGGATTTGGTAGCTGCTAACATTGTGAAAGGAGGGTTCTCTTACAGGTAA 159 0.4277 FTGGDTGIAISKKSSMIPLQMELGGKDACIVLEDADLDLVAANIVKGGFSYR 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme173780g00001 52 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 25 50 IPR016163 GO:0016620
Trme173780g00001 52 Pfam Aldehyde dehydrogenase family 1 51 IPR015590 GO:0016491
Trme173780g00001 52 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 21 28 IPR029510 GO:0016491
Trme173780g00001 52 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 24 IPR016162 GO:0016491
Trme173780g00001 52 PANTHER ALDEHYDE DEHYDROGENASE 1 51 - -
Trme173780g00001 52 SUPERFAMILY ALDH-like 2 50 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme173780g00001 Trme-Chr173780 98 256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme173780g00001 1 51 Aldehyde Dehydrogenase Gene Family AT2G24270 88.235 2.20e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme173780g00001 K00131 - bvg:104883240 100.523