Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme173727g00001 | GTTGTTAAAGGTGAAGATGGAAAGACCAAGGTCGTCGGTACTCCAACAGAATCAGCATTGCTTGGATTTGGTTTGATTTTAGGAGGTGATTCTAAGTTTTACAATGACAAGTATAAGATAGTTAAGGTTGAACCGTTCAATTCAACCCGAAAAAAGATGTCGGTTCTTGTTTCTCTTCCTAATAGCAATAACAAAACTAGAGCATTTTGTAAAGGAGCATCCGAAATAGTGGTTAAAATGTGTGACAAAGTTGTTAATTCAAAAGGTAAAGTTGTTGATTTGATTGAACAACAAAGAAATAGCATCAATGAAGTTATTAATAGTTTTGCTTCTGAAGCACTGAGAACACTCTGCATAGCTTTTACGGATATTGAAGGAGGCTCTGATGGTAATAACACTATTCCCGAGGATAAATATACTTTAATTGCTATTATTGGGATCAAGGATCCAGTGAGACCTGGAGTTAAAGAAGCTGTTAAGACTTGTTTGGA | 491 | 0.3564 | VVKGEDGKTKVVGTPTESALLGFGLILGGDSKFYNDKYKIVKVEPFNSTRKKMSVLVSLPNSNNKTRAFCKGASEIVVKMCDKVVNSKGKVVDLIEQQRNSINEVINSFASEALRTLCIAFTDIEGGSDGNNTIPEDKYTLIAIIGIKDPVRPGVKEAVKTCL | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme173727g00001 | 163 | Pfam | Cation transport ATPase (P-type) | 5 | 84 | - | - | |
| Trme173727g00001 | 163 | PANTHER | CATION TRANSPORTING ATPASE | 7 | 162 | - | - | |
| Trme173727g00001 | 163 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 6 | 155 | IPR023299 | GO:0000166 | |
| Trme173727g00001 | 163 | Gene3D | - | 2 | 152 | IPR023299 | GO:0000166 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trme173727g00001 | Trme-Chr173727 | 1 | 491 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme173727g00001 | 1 | 162 | Primary Pumps ATPases | AT3G57330 | 58.642 | 2.24e-58 | 193 |