Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17370g00001 GTCTTAGACACAAAGTTACATTTGATGTCATTTGCTGCACATTTTTTGGTGCACGGTGCAGTGTACCCACTGTCAGTAGTCAAGTCTAGACTACAGTGGATTCCTATTGAAGAAGACAGCAAAAGGTTTATCTCCAATGAAGCTGGTGCAATGGCTTCCACTCTATTGGCCCAATCTATTTCTATTCCTGGTGACCTGCTTAGAAAAACCATGATGGTGCATGGTTATGAGTGGAGGGTTGCATACAAAGGAGGAGTCGACATAGCATCAAAAATTATAAAAAAGGACGGGTTCAAGGTCTATATAAAGGCTATGGGATTCCCTTAA 327 0.4159 VLDTKLHLMSFAAHFLVHGAVYPLSVVKSRLQWIPIEEDSKRFISNEAGAMASTLLAQSISIPGDLLRKTMMVHGYEWRVAYKGGVDIASKIIKKDGFKVYIKAMGFP 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17370g00001 108 Gene3D Mitochondrial carrier domain 33 107 IPR023395 -
Trme17370g00001 108 SUPERFAMILY Mitochondrial carrier 46 100 IPR023395 -
Trme17370g00001 108 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 36 99 - -
Trme17370g00001 108 ProSiteProfiles Solute carrier (Solcar) repeat profile. 41 108 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17370g00001 Trme-Chr17370 100 756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17370g00001 35 107 Chloroplast and Mitochondria Gene Families AT5G15640 33.333 2.20e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17370g00001 - K15121 osa:4334148 56.225