Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17366g00001 ATGAAGCTGGGGCTCAGATCCGCTCAGCATTTTATCTATATCGAGAATCAATACTTCATTGGATCATCCTTTGCTTGGCCATCTTACAAAGAAGCAGGTGCTGATAACTTAATTCCAATGGAGTTGGCGCTGAAGATTGTCAGTAAGATCAGATCCCGGGAGAGATTTACTGTTTATATTGTCATTCCAATGTGGCCTGAAGGCGTCCCTTCTTCTGCCGCCGTGCAAGAAATGCTCTATTTTCAGGGACAAACTATGCAAATGATGTATGAAATCATAGCTCGGGAATTAAAATATATGAAACTTGACAATAGCCATCCACAAGATTACCTCAATTTTTACTGTCTTGGTAACCGAGAGAAGTTTGCAGCTGAAGTTTCAAATCCAAATAATTCACATTGTGATCATGGCGACACG 417 0.4077 MKLGLRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPMELALKIVSKIRSRERFTVYIVIPMWPEGVPSSAAVQEMLYFQGQTMQMMYEIIARELKYMKLDNSHPQDYLNFYCLGNREKFAAEVSNPNNSHCDHGDT 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17366g00001 139 SUPERFAMILY Phospholipase D/nuclease 5 93 - -
Trme17366g00001 139 PANTHER PHOSPHOLIPASE D 6 125 IPR015679 -
Trme17366g00001 139 Gene3D Endonuclease Chain A 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17366g00001 Trme-Chr17366 197 1405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17366g00001 5 132 Phospholipase D Gene Family (Wang group) AT4G35790 70.312 8.80e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17366g00001 K01115 - gmx:100789389 224.942