Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme173587g00001 ATGGTGTCAGTTTCTGGTGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGACTCGTTGCACGGTTGTCTGCATCTGGAAGTTCAATCTACAAATCATTAAGATGCAAAGAACCGGAAAGTGCCGAGCTTCTCTCTTACATGAACATACTTTATGAGGTTTGCCCTTACTTCAAATTCGGATACATGTCTGCAAACGGAGCCATTGCAGAAGCAATGAAAAATGAAGCCAGAGTTCATATTATTGATTTCCAAATTTCTCAAGGAAGCCAATGGATTTCGTTGATTCAAGCTTTTGCAGCTAGGCCTGGTGGGCCGCCGCATATCCGTATTACAGGTATCGATGATCCGACCTCAGCTTATGCCCGTGGAGGTGGACTACATATAGTTGAAAAGAGGTTATCAAAGCTTGCTCAGCATTTCAAGGTTCCGTTTGAATTTCATGCCGCAGCTAT 458 0.4367 MVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKSLRCKEPESAELLSYMNILYEVCPYFKFGYMSANGAIAEAMKNEARVHIIDFQISQGSQWISLIQAFAARPGGPPHIRITGIDDPTSAYARGGGLHIVEKRLSKLAQHFKVPFEFHAAA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme173587g00001 152 ProSiteProfiles GRAS family profile. 1 152 IPR005202 -
Trme173587g00001 152 Pfam GRAS domain family 2 150 IPR005202 -
Trme173587g00001 152 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 150 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme173587g00001 Trme-Chr173587 1 458 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme173587g00001 1 149 GRAS Transcription Factor Family AT5G48150 83.333 4.92e-86 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme173587g00001 GRAS 1.5e-53 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme173587g00001 - - gmx:100808300 284.263