Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17349g00001 CATGAGGCATTACTTGTGGAAAGCATTGCTCAACACATACATAGAAAGTTGGTTCCCAAATTGCCATCTTGTACGGAGAACCTTGTTGGGATTGCTTCAAAGGTGGAGGAAGTGAACAAGCTCATAGGTATGGGGTTGAATGACGTTCGCTTTATAGGCATATGGGGTATGGGTGGCATAGGTAAGACTACTATTGCTAGAGCTGTCTATGAGGCAATCCACTGTGAATTTGAAGTTACTTGCTTTCTTGTTAATGTTAGAGAGATGTCTGAGTCAAATGGTTTGGTTCACATACAAAGACAACTGCTTTCTCATCTGAGT 321 0.4174 HEALLVESIAQHIHRKLVPKLPSCTENLVGIASKVEEVNKLIGMGLNDVRFIGIWGMGGIGKTTIARAVYEAIHCEFEVTCFLVNVREMSESNGLVHIQRQLLSHLS 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17349g00001 107 Gene3D - 10 107 IPR027417 -
Trme17349g00001 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 105 IPR027417 -
Trme17349g00001 107 Pfam NB-ARC domain 38 104 IPR002182 GO:0043531
Trme17349g00001 107 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 106 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17349g00001 Trme-Chr17349 15 335 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17349g00001 29 95 WRKY Transcription Factor Family AT5G45050 41.791 8.39e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17349g00001 - - aip:107635063 158.688