Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme17336g00001 TCCCCCGCTCCTTCCCCTGAACCTAACTGTCCTCCTCCTCAACCTCCACCAAATCCTCCTCCTTCACCTAAGCCGCGCCCTCCAGCCCCTCGGCCGCGCCCCCTCACTTTCCGAATAGATAGGGCCCGCCGCGTACTTATCCAATTCGCTACAACCGTCAAGCCGAATAGCATCACCACAAACTGGATTAATAGCACAAAAGATACATGTCAGTTTAATAGAATCCTTTGTGGCACATACCCAACGGATGGCCAACGTGCAGTTGCTGGATTGGACTTAAACCAAGGAAGACTCTCAGGTAAAACCTGTGACAATATACCATTAACCGGTCTCTTAGACAAATTAGAAGAGTTAACATTCTTCCATGTAAACTCCAACAGTTTCTCAGATAAAATCCCAACACAAATCCTTAATTTCCCTTATTTCTACGAACTTGACCTTAGTAACAACAAATTTGTCGGCGAGTTTCCGGAAGTAGTTATTAAAGCTACAAATCTAGTTTTTCTAGACCTCAGGTTCAACAATCTAGAAGGTCCTGTTCCATCAGACCTATTTAAAAAGGATCTTGACGTAATTTTCATCAACAACAACAAATTCACCGGAAGTTTACCTGCGAATTTCGGGTCTACCCCTGCAAGGTACTTAACATTTGCACGCAATCAATTAACAGGTGAAATTCCTAGAAGTATCGGCGATGCTTCGAAAACTTTAACTGAAGTGCTTTTTTTGGGTAATAAATTTGAAGGGTGTTTACCATTTGAAATTGGGTATCTGAAAAAAGCAACAGTTTTTGATGTTAGTTTGAATTCATTAACTGGGCCTATTCCAGCTTCATTTGGTTGTTTGGAAAAGATTCAGTTTTTGAATTTGGCACATAACAAATTCTATGGTACTGTTCCTGAGAGTGTTTGTGTTCTACCTGGGATAAAAAACAATGGAAATTTATCTTTGTCGGATAATTATTTCACTGCAATTGATCCAGCATGTTGGTATTTGTTGAAATCTAAGATATTGGATGTTAGTAACAATTGTATTCCTGGGCTTCCTAATCAAAGATCAAAGAAAGATTGTTATGATTTTCAATGTAAAGTGAAGCCATGTTCGAATCATCAGAGTCTGAGTTATGTTCCTTGTAAGACACGTTGGGGGGCTAAACAGGACACTGCTCCTGTTTCTCAAGAAATGGCTACTGAGCCTGTTACTTACAAGTCTCTTAAACCTCATCATCGGTTGAGAATGTGA 1242 0.4026 SPAPSPEPNCPPPQPPPNPPPSPKPRPPAPRPRPLTFRIDRARRVLIQFATTVKPNSITTNWINSTKDTCQFNRILCGTYPTDGQRAVAGLDLNQGRLSGKTCDNIPLTGLLDKLEELTFFHVNSNSFSDKIPTQILNFPYFYELDLSNNKFVGEFPEVVIKATNLVFLDLRFNNLEGPVPSDLFKKDLDVIFINNNKFTGSLPANFGSTPARYLTFARNQLTGEIPRSIGDASKTLTEVLFLGNKFEGCLPFEIGYLKKATVFDVSLNSLTGPIPASFGCLEKIQFLNLAHNKFYGTVPESVCVLPGIKNNGNLSLSDNYFTAIDPACWYLLKSKILDVSNNCIPGLPNQRSKKDCYDFQCKVKPCSNHQSLSYVPCKTRWGAKQDTAPVSQEMATEPVTYKSLKPHHRLRM 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme17336g00001 413 MobiDBLite consensus disorder prediction 1 34 - -
Trme17336g00001 413 SUPERFAMILY L domain-like 49 345 - -
Trme17336g00001 413 Gene3D Ribonuclease Inhibitor 213 376 IPR032675 -
Trme17336g00001 413 Gene3D Ribonuclease Inhibitor 40 212 IPR032675 -
Trme17336g00001 413 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 51 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme17336g00001 Trme-Chr17336 1 1242 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme17336g00001 35 360 Leucine-rich Repeat extension Gene Families AT3G24480 41.566 2.20e-77 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme17336g00001 - - psat:127108214 575.089