Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme173124g00001 TTTGCTAGATCAACCAAACCATGCCCTTCGTTGAAAAGTGATGTCTATGCATTCGGAGTTGTCTTGTTAGAGCTCTTATCAGGAAGAAAATCCGGAGAAATTGTTTCCGGGATTTCTGGCGTTGTTGAACTTACCGAATGGGTGAGATTCTTAGCTGAACAAGGTCGCTCTAACCAATGCTTCGAAAAATCCCTCGTGGAAAATCACAACGGAGAAGGACCGTATATGATTCTTGATAACATGCTAAAAGTAGCTCTTAGATGCATCCTTCCAGCATCTGAGAGACCTGATATGAAAACAGTCTTTGATGATCTTTCAACAATAAGGGAGAGTTGA 336 0.4137 FARSTKPCPSLKSDVYAFGVVLLELLSGRKSGEIVSGISGVVELTEWVRFLAEQGRSNQCFEKSLVENHNGEGPYMILDNMLKVALRCILPASERPDMKTVFDDLSTIRES 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme173124g00001 111 PANTHER OS07G0626500 PROTEIN 1 108 - -
Trme173124g00001 111 SUPERFAMILY Protein kinase-like (PK-like) 9 105 IPR011009 -
Trme173124g00001 111 Gene3D Transferase(Phosphotransferase) domain 1 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme173124g00001 Trme-Chr173124 1 336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme173124g00001 10 109 Receptor kinase-like Gene Family AT3G51740 33.663 3.55e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme173124g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme173124g00001 - - lja:Lj2g3v2974830.1 181.03